Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid transport family protein | VSVS12_RS18735 | P0AAD4 | Negative | 884504 - 885700 | 42019.8 |
| acp phosphodiesterase | VSVS12_RS18740 | Q6D857 | Positive | 886258 - 886845 | 22846.1 |
| dead/deah box helicase | VSVS12_RS18745 | Not Available | Positive | 886904 - 888163 | 46725.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS18750 | Not Available | Negative | 888279 - 888689 | 15597.1 |
| is4 family transposase | VSVS12_RS18755 | Not Available | Positive | 888798 - 890006 | 45975.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS18760 | Not Available | Negative | 890019 - 890384 | 14108.2 |
| sdr family oxidoreductase | VSVS12_RS18765 | P50203 | Positive | 891371 - 892111 | 26234.6 |
| acetyl-coa c-acetyltransferase | VSVS12_RS18770 | P14611 | Positive | 892127 - 893341 | 42249.7 |
| phasin family protein | VSVS12_RS18775 | Not Available | Positive | 893367 - 893714 | 13080.5 |
| class i poly(r)-hydroxyalkanoic acid synthase | VSVS12_RS18780 | P52070 | Positive | 893774 - 895558 | 67680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



