Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpa | VSVS12_RS18585 | A5EZN1 | Negative | 850418 - 851170 | 27780.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS18590 | Q9F7D4 | Positive | 851430 - 852251 | 29574.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | VSVS12_RS18595 | Not Available | Positive | 852458 - 852709 | 9183.88 |
| type ii toxin-antitoxin system rele/pare family toxin | VSVS12_RS18600 | Q60228 | Positive | 852699 - 852986 | 11078.7 |
| is30 family transposase | VSVS12_RS18605 | Not Available | Negative | 853025 - 853993 | 38320.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS18610 | P09147 | Positive | 854087 - 854281 | 7282.2 |
| transketolase | VSVS12_RS18615 | Q7MHK7 | Negative | 854433 - 856424 | 71661.5 |
| transaldolase | VSVS12_RS18620 | A7N1Z7 | Negative | 856519 - 857469 | 34820.6 |
| sugar-binding transcriptional regulator | VSVS12_RS18625 | B1XEA0 | Positive | 857936 - 858937 | 35949.0 |
| glycoside hydrolase family 18 protein | VSVS12_RS18630 | P32823 | Positive | 859083 - 860375 | 47310.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



