Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpm family protein | VSVS12_RS15005 | P52112 | Negative | 34832 - 35164 | 12303.7 |
| hypothetical protein | VSVS12_RS15010 | Not Available | Negative | 35177 - 35533 | 13172.3 |
| hypothetical protein | VSVS12_RS15015 | Not Available | Positive | 35769 - 36095 | 12353.9 |
| ferredoxin--nadp reductase | VSVS12_RS15020 | P28901 | Negative | 36246 - 37010 | 28478.2 |
| hypothetical protein | VSVS12_RS15025 | Not Available | Positive | 37196 - 37414 | 8542.44 |
| alpha/beta fold hydrolase | VSVS12_RS15030 | P46547 | Positive | 37622 - 38920 | 49254.2 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | VSVS12_RS15035 | P45388 | Positive | 38989 - 39402 | 15448.8 |
| duf3859 domain-containing protein | VSVS12_RS15040 | Not Available | Positive | 39523 - 43662 | 158361.0 |
| hypothetical protein | VSVS12_RS15045 | Not Available | Negative | 43729 - 44547 | 30234.5 |
| marr family winged helix-turn-helix transcriptional regulator | VSVS12_RS15050 | Not Available | Negative | 44670 - 45098 | 16299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



