Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dm13 domain-containing protein | VSVS12_RS18045 | Not Available | Positive | 694678 - 695145 | 17307.5 |
| mechanosensitive ion channel family protein | VSVS12_RS18050 | Not Available | Positive | 695219 - 696076 | 32561.8 |
| eal domain-containing protein | VSVS12_RS18055 | P39584 | Positive | 696366 - 698396 | 75832.4 |
| acr3 family arsenite efflux transporter | VSVS12_RS18060 | P45946 | Negative | 698441 - 699526 | 39554.9 |
| helix-turn-helix transcriptional regulator | VSVS12_RS18065 | Not Available | Negative | 699613 - 699951 | 12465.3 |
| cobinamide adenolsyltransferase | VSVS12_RS18070 | Not Available | Negative | 700086 - 700703 | 22781.8 |
| ig-like domain-containing protein | VSVS12_RS18075 | Not Available | Positive | 701181 - 713309 | 430158.0 |
| hypothetical protein | VSVS12_RS18080 | Not Available | Positive | 713509 - 713769 | 9387.79 |
| hypothetical protein | VSVS12_RS23270 | Not Available | Negative | 713968 - 714129 | 5884.84 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | VSVS12_RS18085 | P43774 | Negative | 714404 - 715852 | 52707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



