Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | VSVS12_RS14955 | P71082 | Positive | 24227 - 26344 | 78197.5 |
| duf2057 family protein | VSVS12_RS14960 | Q7MCE1 | Positive | 26579 - 27217 | 23338.6 |
| gnat family n-acetyltransferase | VSVS12_RS14965 | Not Available | Positive | 27294 - 27827 | 19998.9 |
| hypothetical protein | VSVS12_RS14970 | Not Available | Positive | 27971 - 28396 | 15585.8 |
| sco family protein | VSVS12_RS14975 | Q8VYP0 | Positive | 28393 - 28983 | 21777.8 |
| copper chaperone pcu(a)c | VSVS12_RS14980 | Not Available | Positive | 28996 - 29442 | 16082.5 |
| ribosome small subunit-dependent gtpase a | VSVS12_RS14985 | Q87FP9 | Positive | 29563 - 30615 | 39110.6 |
| serine/threonine transporter sstt | VSVS12_RS14990 | Q87FP8 | Positive | 30883 - 32106 | 42301.5 |
| tetratricopeptide repeat protein | VSVS12_RS14995 | Not Available | Negative | 32297 - 33463 | 44499.1 |
| glucosamine-6-phosphate deaminase | VSVS12_RS15000 | B7VTI0 | Positive | 33972 - 34772 | 29558.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



