Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | VSVS12_RS17500 | Q5A599 | Negative | 564251 - 566605 | 89099.1 |
| duf3131 domain-containing protein | VSVS12_RS17505 | Not Available | Negative | 566655 - 568142 | 55782.6 |
| hypothetical protein | VSVS12_RS17510 | Not Available | Positive | 568465 - 569097 | 23815.2 |
| type i secretion system permease/atpase | VSVS12_RS17515 | P23596 | Positive | 569173 - 570882 | 61800.6 |
| hlyd family type i secretion periplasmic adaptor subunit | VSVS12_RS17520 | Q7ANN5 | Positive | 570892 - 572217 | 49214.6 |
| hypothetical protein | VSVS12_RS17525 | Not Available | Positive | 572217 - 572471 | 9671.06 |
| calcium-binding protein | VSVS12_RS17530 | Not Available | Negative | 572598 - 577133 | 151127.0 |
| hypothetical protein | VSVS12_RS17535 | Not Available | Negative | 577272 - 578174 | 34179.8 |
| spoiie family protein phosphatase | VSVS12_RS17540 | Q4A160 | Positive | 578490 - 579743 | 46765.5 |
| stas domain-containing protein | VSVS12_RS17545 | Not Available | Positive | 579695 - 580027 | 12410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



