Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | VSVS12_RS17350 | B7VQP0 | Negative | 527688 - 528716 | 37464.7 |
| hybrid-cluster nad(p)-dependent oxidoreductase | VSVS12_RS17355 | P75863 | Positive | 529012 - 530823 | 67484.6 |
| dmt family transporter | VSVS12_RS17360 | O31448 | Negative | 530894 - 531799 | 32599.4 |
| helix-turn-helix domain-containing protein | VSVS12_RS17365 | Not Available | Positive | 531898 - 532689 | 30135.9 |
| methyl-accepting chemotaxis protein | VSVS12_RS17370 | Q88NI1 | Negative | 532833 - 534578 | 62711.5 |
| start domain-containing protein | VSVS12_RS17375 | Not Available | Negative | 534873 - 535481 | 23065.2 |
| m14 family metallocarboxypeptidase | VSVS12_RS17380 | Not Available | Negative | 535730 - 536656 | 33809.3 |
| alpha-amylase family protein | VSVS12_RS17385 | P22630 | Positive | 536941 - 538296 | 51035.4 |
| arac family transcriptional regulator | VSVS12_RS17390 | Not Available | Negative | 538330 - 538932 | 22459.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | VSVS12_RS17395 | Not Available | Positive | 539122 - 540225 | 41474.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



