Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | VSVS12_RS14910 | O52485 | Negative | 10388 - 13516 | 114741.0 |
| arac family transcriptional regulator | VSVS12_RS14915 | Q51872 | Negative | 13703 - 14518 | 29892.0 |
| pega domain-containing protein | VSVS12_RS14920 | Not Available | Positive | 14958 - 16058 | 41266.4 |
| sumf1/egtb/pvdo family nonheme iron enzyme | VSVS12_RS14925 | Q8NBJ7 | Positive | 16211 - 18037 | 67481.9 |
| helix-turn-helix transcriptional regulator | VSVS12_RS14930 | Not Available | Positive | 18332 - 19051 | 27087.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS14935 | Not Available | Negative | 19118 - 19752 | 23360.3 |
| hlyd family type i secretion periplasmic adaptor subunit | VSVS12_RS14940 | Q03025 | Positive | 19978 - 21411 | 53861.0 |
| hypothetical protein | VSVS12_RS23035 | Not Available | Positive | 21381 - 21542 | 5902.31 |
| transglutaminase-like cysteine peptidase | VSVS12_RS14945 | Not Available | Positive | 21628 - 22290 | 25255.4 |
| eal domain-containing protein | VSVS12_RS14950 | Not Available | Positive | 22296 - 24206 | 71561.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



