Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose pyranase | VSVS12_RS17240 | A5F1C1 | Positive | 499706 - 500125 | 15404.5 |
| ribokinase | VSVS12_RS17245 | Q9H477 | Positive | 500158 - 501084 | 32577.9 |
| l-fucose:h+ symporter permease | VSVS12_RS17250 | P11551 | Positive | 501149 - 502471 | 48425.5 |
| aldose 1-epimerase family protein | VSVS12_RS17255 | Not Available | Positive | 502522 - 503526 | 37616.4 |
| ribokinase | VSVS12_RS17260 | P0A9J7 | Positive | 503718 - 504635 | 32239.4 |
| substrate-binding domain-containing protein | VSVS12_RS17265 | P0ACQ2 | Positive | 504653 - 505657 | 37239.8 |
| conjugal transfer protein traf | VSVS12_RS17275 | Not Available | Positive | 506151 - 507299 | 41067.7 |
| taxi family trap transporter solute-binding subunit | VSVS12_RS17280 | Not Available | Positive | 507703 - 508707 | 35852.5 |
| trap transporter permease | VSVS12_RS17285 | Not Available | Positive | 508821 - 510935 | 75701.8 |
| dead/deah box helicase | VSVS12_RS17290 | P44586 | Negative | 511079 - 513103 | 74252.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



