Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | VSVS12_RS17095 | A9CEQ8 | Positive | 470872 - 472014 | 41909.2 |
| dksa/trar family c4-type zinc finger protein | VSVS12_RS17100 | P41039 | Positive | 472381 - 472650 | 9978.78 |
| hemolysin family protein | VSVS12_RS17105 | P9WFP2 | Positive | 472988 - 474364 | 49664.1 |
| cnnm domain-containing protein | VSVS12_RS17110 | P9WLQ7 | Positive | 474361 - 475377 | 36052.6 |
| helix-turn-helix domain-containing protein | VSVS12_RS17115 | P76241 | Negative | 475535 - 476332 | 30201.6 |
| multidrug effflux mfs transporter | VSVS12_RS17120 | Q1RI77 | Positive | 476432 - 477553 | 39895.2 |
| alkyl/aryl-sulfatase | VSVS12_RS17125 | Q9I5I9 | Negative | 477728 - 479749 | 74436.4 |
| lysr family transcriptional regulator | VSVS12_RS17130 | P77746 | Positive | 479866 - 480756 | 33528.6 |
| transposase | VSVS12_RS17135 | Not Available | Negative | 481054 - 481932 | 33824.6 |
| cbs domain-containing protein | VSVS12_RS17140 | Not Available | Positive | 482138 - 482374 | 8402.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



