Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydch family protein | VSVS12_RS17045 | Not Available | Negative | 458844 - 459101 | 10147.1 |
| toxin-antitoxin system ywqk family antitoxin | VSVS12_RS17050 | Not Available | Negative | 459257 - 460252 | 38182.2 |
| toxin-antitoxin system ywqk family antitoxin | VSVS12_RS17055 | Not Available | Negative | 460255 - 461604 | 52380.1 |
| tetratricopeptide repeat protein | VSVS12_RS17060 | Not Available | Negative | 461601 - 462857 | 47131.0 |
| solute carrier family 23 protein | VSVS12_RS17065 | P50487 | Positive | 463391 - 464722 | 46571.6 |
| guanine deaminase | VSVS12_RS17070 | O14057 | Positive | 464725 - 466104 | 50900.4 |
| bspa family leucine-rich repeat surface protein | VSVS12_RS17075 | Not Available | Positive | 466312 - 467562 | 47472.6 |
| uxaa family hydrolase | VSVS12_RS17080 | Not Available | Positive | 468167 - 468496 | 11955.6 |
| uxaa family hydrolase | VSVS12_RS17085 | O34673 | Positive | 468496 - 469671 | 41774.2 |
| dmt family transporter | VSVS12_RS17090 | Not Available | Positive | 469785 - 470756 | 34051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



