Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | VSVS12_RS14695 | A7N080 | Positive | 3231688 - 3231984 | 11112.5 |
| sensor domain-containing diguanylate cyclase | VSVS12_RS14700 | Not Available | Positive | 3232230 - 3233219 | 37276.3 |
| zn(2+)-responsive transcriptional regulator | VSVS12_RS14705 | P0ACS6 | Negative | 3233216 - 3233656 | 16251.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | VSVS12_RS14710 | Q5E257 | Positive | 3233915 - 3235504 | 57260.9 |
| phosphoribosylamine--glycine ligase | VSVS12_RS14715 | Q87KS8 | Positive | 3235788 - 3237077 | 45640.5 |
| duf1481 domain-containing protein | VSVS12_RS14720 | Not Available | Negative | 3237141 - 3237836 | 26015.7 |
| nucleoid-associated protein hu-alpha | VSVS12_RS14725 | P28080 | Negative | 3237886 - 3238158 | 9421.37 |
| cnnm domain-containing protein | VSVS12_RS14730 | P74078 | Positive | 3238511 - 3239611 | 40747.3 |
| yjag family protein | VSVS12_RS14735 | P32680 | Negative | 3239670 - 3240257 | 22693.0 |
| d-2-hydroxyacid dehydrogenase | VSVS12_RS14740 | A8GD46 | Positive | 3240329 - 3241255 | 34763.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



