Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | VSVS12_RS14595 | B8CHC9 | Positive | 3206337 - 3206816 | 18000.7 |
| fxsa family protein | VSVS12_RS14600 | P37147 | Negative | 3206903 - 3207433 | 19131.6 |
| aspartate ammonia-lyase | VSVS12_RS14605 | P44324 | Positive | 3207857 - 3209305 | 52483.0 |
| anaerobic c4-dicarboxylate transporter | VSVS12_RS14610 | O34245 | Positive | 3209534 - 3210841 | 45220.6 |
| protein-disulfide reductase dsbd | VSVS12_RS14615 | Q87KW0 | Positive | 3211079 - 3212884 | 65921.0 |
| response regulator transcription factor | VSVS12_RS14620 | P29369 | Positive | 3213043 - 3213678 | 22943.9 |
| marc family protein | VSVS12_RS14625 | Q59071 | Positive | 3213834 - 3214460 | 22384.4 |
| duf4212 domain-containing protein | VSVS12_RS14630 | Not Available | Positive | 3214678 - 3214941 | 10383.7 |
| sodium:solute symporter family protein | VSVS12_RS14635 | P31640 | Positive | 3214954 - 3216681 | 61465.6 |
| hypothetical protein | VSVS12_RS14640 | Not Available | Positive | 3216833 - 3217321 | 17775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



