Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | VSVS12_RS14545 | P32166 | Negative | 3197252 - 3198169 | 32815.2 |
| elongation factor p | VSVS12_RS14550 | A7MZ47 | Negative | 3198276 - 3198842 | 20635.8 |
| ef-p beta-lysylation protein epmb | VSVS12_RS14555 | P39280 | Positive | 3198876 - 3199898 | 38307.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS14560 | Not Available | Positive | 3199977 - 3200468 | 18188.8 |
| mgtc/sapb family protein | VSVS12_RS14565 | Q57I71 | Positive | 3200559 - 3201068 | 18138.9 |
| 6-phosphofructokinase | VSVS12_RS14570 | A7MX59 | Negative | 3201159 - 3202121 | 34672.9 |
| cdf family cation-efflux transporter fief | VSVS12_RS14575 | A7MQ82 | Negative | 3202394 - 3203302 | 33435.9 |
| cpxp family protein | VSVS12_RS14580 | Not Available | Negative | 3203486 - 3203974 | 18220.1 |
| response regulator | VSVS12_RS14585 | Not Available | Positive | 3204155 - 3204841 | 25530.9 |
| envelope stress sensor histidine kinase cpxa | VSVS12_RS14590 | P0AE84 | Positive | 3204841 - 3206223 | 51717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



