Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3191406 - 3191481 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3191494 - 3191568 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3191603 - 3191687 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3191741 - 3191816 | Not Available |
| type i pantothenate kinase | VSVS12_RS14515 | Q7MGQ9 | Positive | 3192022 - 3192951 | 35475.6 |
| duf805 domain-containing protein | VSVS12_RS14520 | Not Available | Negative | 3193087 - 3193512 | 16046.0 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | VSVS12_RS14525 | Not Available | Negative | 3193633 - 3193980 | 13184.8 |
| triose-phosphate isomerase | VSVS12_RS14530 | Q8DCQ3 | Positive | 3194251 - 3195021 | 26888.9 |
| mate family efflux transporter | VSVS12_RS14535 | Q8EIX5 | Positive | 3195165 - 3196556 | 49848.4 |
| ribonuclease e activity regulator rraa | VSVS12_RS14540 | Q87T23 | Negative | 3196664 - 3197176 | 18275.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



