Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome rescue gtpase hflx | VSVS12_RS14290 | P25519 | Negative | 3152837 - 3154126 | 48696.4 |
| rna chaperone hfq | VSVS12_RS14295 | A7MX76 | Negative | 3154167 - 3154427 | 9711.68 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | VSVS12_RS14300 | Q8CWK9 | Negative | 3154611 - 3155558 | 35698.0 |
| dna mismatch repair endonuclease mutl | VSVS12_RS14305 | Q87L05 | Negative | 3155555 - 3157633 | 76532.9 |
| lysm peptidoglycan-binding domain-containing protein | VSVS12_RS14310 | P26365 | Negative | 3157646 - 3159364 | 62308.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | VSVS12_RS14315 | P0AF68 | Negative | 3159358 - 3159822 | 17381.5 |
| trna epoxyqueuosine(34) reductase queg | VSVS12_RS14320 | Q9KV16 | Positive | 3160011 - 3161132 | 42504.1 |
| Trna-gly | Not Available | Not Available | Positive | 3161721 - 3161796 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3161829 - 3161905 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3161958 - 3162033 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



