Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | VSVS12_RS14140 | Not Available | Positive | 3128026 - 3128496 | 17366.0 |
| is4 family transposase | VSVS12_RS14145 | Not Available | Positive | 3128605 - 3129813 | 45975.1 |
| uracil-dna glycosylase family protein | VSVS12_RS14150 | Not Available | Positive | 3129826 - 3130623 | 28244.1 |
| duf3299 domain-containing protein | VSVS12_RS14155 | Not Available | Positive | 3130626 - 3131126 | 18489.2 |
| tigr03899 family protein | VSVS12_RS14160 | Not Available | Positive | 3131621 - 3132517 | 33870.6 |
| glucose-6-phosphate isomerase | VSVS12_RS14165 | A7MSY9 | Negative | 3132658 - 3134310 | 61101.1 |
| secondary thiamine-phosphate synthase enzyme yjbq | VSVS12_RS14170 | P0AF49 | Positive | 3134586 - 3135005 | 15510.2 |
| alanine racemase | VSVS12_RS14175 | Q9KUY6 | Negative | 3135082 - 3136158 | 38856.8 |
| replicative dna helicase | VSVS12_RS14180 | P0A1Q5 | Negative | 3136172 - 3137584 | 52394.3 |
| duf481 domain-containing protein | VSVS12_RS14185 | Not Available | Positive | 3137769 - 3138530 | 28808.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



