Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | VSVS12_RS16950 | Q18DN4 | Negative | 430819 - 438603 | 282070.0 |
| redox-sensitive transcriptional activator soxr | VSVS12_RS16955 | Q51506 | Positive | 439002 - 439445 | 16347.4 |
| aec family transporter | VSVS12_RS16960 | Not Available | Negative | 439506 - 440381 | 31439.1 |
| patatin family protein | VSVS12_RS16965 | P39407 | Positive | 440586 - 441443 | 32220.2 |
| aaa family atpase | VSVS12_RS16970 | Not Available | Negative | 441459 - 441986 | 19580.2 |
| abc-f family atp-binding cassette domain-containing protein | VSVS12_RS16975 | A0A0H2VBH0 | Positive | 442301 - 443911 | 60165.0 |
| hypothetical protein | VSVS12_RS16980 | Not Available | Positive | 444026 - 444541 | 18973.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS23575 | Not Available | Negative | 444672 - 444773 | 3881.67 |
| is4 family transposase | VSVS12_RS16985 | Not Available | Negative | 444788 - 445996 | 45975.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS16990 | Not Available | Positive | 446589 - 447532 | 35017.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



