Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4902 domain-containing protein | VSVS12_RS13940 | Not Available | Negative | 3085602 - 3085994 | 14403.7 |
| autoinducer binding domain-containing protein | VSVS12_RS13945 | Q51786 | Positive | 3086179 - 3086901 | 27007.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | VSVS12_RS13950 | Q8DEF3 | Negative | 3087120 - 3088952 | 66965.0 |
| deor/glpr family dna-binding transcription regulator | VSVS12_RS13955 | P15082 | Negative | 3089004 - 3089765 | 28050.6 |
| pyruvate kinase pykf | VSVS12_RS13960 | P0AD62 | Positive | 3090234 - 3091646 | 50100.5 |
| oxidative stress defense protein | VSVS12_RS13965 | O52400 | Negative | 3091795 - 3092490 | 25024.9 |
| lysr family transcriptional regulator argp | VSVS12_RS13970 | Q8DC96 | Negative | 3092600 - 3093496 | 33386.2 |
| lyse/argo family amino acid transporter | VSVS12_RS13975 | B5XUC1 | Positive | 3093641 - 3094270 | 22452.1 |
| small-conductance mechanosensitive channel mscs | VSVS12_RS13980 | P57527 | Negative | 3094359 - 3095225 | 31050.9 |
| class ii fructose-bisphosphate aldolase | VSVS12_RS13985 | P0AB72 | Negative | 3095545 - 3096621 | 38484.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



