Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | VSVS12_RS23415 | Not Available | Positive | 3075055 - 3075205 | 5973.33 |
| ggdef domain-containing protein | VSVS12_RS13895 | Q8X8Q3 | Positive | 3075712 - 3076851 | 43179.3 |
| ncs2 family permease | VSVS12_RS13900 | Q46817 | Negative | 3076936 - 3078258 | 44954.4 |
| hypothetical protein | VSVS12_RS13905 | Not Available | Positive | 3078727 - 3079167 | 17215.6 |
| lysophospholipid acyltransferase family protein | VSVS12_RS13910 | Not Available | Positive | 3079317 - 3081071 | 66489.4 |
| trap transporter substrate-binding protein | VSVS12_RS13915 | Q8YSQ6 | Positive | 3081337 - 3082410 | 40199.3 |
| multidrug efflux smr transporter | VSVS12_RS13920 | Q7N536 | Negative | 3082499 - 3082831 | 11789.8 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | VSVS12_RS13925 | P73138 | Negative | 3083033 - 3084181 | 40719.2 |
| hypothetical protein | VSVS12_RS13930 | Not Available | Negative | 3084504 - 3084893 | 14744.5 |
| acyl-homoserine-lactone synthase | VSVS12_RS13935 | A0A0A7XNA3 | Negative | 3084954 - 3085517 | 21396.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



