Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | VSVS12_RS13755 | A7MWP7 | Positive | 3049418 - 3049633 | 8487.44 |
| gatb/yqey domain-containing protein | VSVS12_RS13760 | P54464 | Positive | 3049659 - 3050102 | 15994.5 |
| dna primase | VSVS12_RS13765 | Q8FDG5 | Positive | 3050249 - 3052012 | 66700.2 |
| rna polymerase sigma factor rpod | VSVS12_RS13770 | P0A2E4 | Positive | 3052111 - 3053967 | 70269.9 |
| Trna-met | Not Available | Not Available | Positive | 3054111 - 3054186 | Not Available |
| integrase domain-containing protein | VSVS12_RS13780 | Not Available | Positive | 3054372 - 3055613 | 46989.9 |
| uracil-dna glycosylase family protein | VSVS12_RS23400 | P32053 | Positive | 3055646 - 3055801 | 5720.75 |
| is3 family transposase | VSVS12_RS13785 | P0CF79 | Negative | 3055837 - 3056987 | 44889.7 |
| methyl-accepting chemotaxis protein | VSVS12_RS23550 | Not Available | Negative | 3057138 - 3058235 | 40484.4 |
| hypothetical protein | VSVS12_RS13800 | Not Available | Negative | 3058326 - 3058586 | 10363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



