Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | VSVS12_RS13655 | A7MYV2 | Negative | 3032585 - 3033334 | 27888.5 |
| ribosome maturation factor rimm | VSVS12_RS13660 | B7VK28 | Negative | 3033362 - 3033916 | 21262.2 |
| 30s ribosomal protein s16 | VSVS12_RS13665 | A7MYV1 | Negative | 3033941 - 3034189 | 9093.91 |
| signal recognition particle protein | VSVS12_RS13670 | P0AGD9 | Negative | 3034401 - 3035780 | 50166.7 |
| inner membrane protein ypjd | VSVS12_RS13675 | P64434 | Positive | 3035963 - 3036757 | 29253.7 |
| hlyc/corc family transporter | VSVS12_RS13680 | P37908 | Positive | 3036886 - 3038160 | 47024.6 |
| rna polymerase sigma factor rpos | VSVS12_RS13685 | O51804 | Negative | 3038333 - 3039316 | 37383.6 |
| murein hydrolase activator nlpd | VSVS12_RS13690 | Q56131 | Negative | 3039394 - 3040314 | 32758.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | VSVS12_RS13695 | A7MTT6 | Negative | 3040317 - 3040943 | 22997.7 |
| 5'/3'-nucleotidase sure | VSVS12_RS13700 | Q9KUI9 | Negative | 3040947 - 3041690 | 26790.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



