Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide-nucleotide amidase | VSVS12_RS13605 | P0A6G4 | Negative | 3022371 - 3022859 | 17127.2 |
| dna mismatch repair protein muts | VSVS12_RS13610 | Q87LQ9 | Positive | 3022944 - 3025511 | 94837.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS13615 | Not Available | Positive | 3025774 - 3026232 | 15722.7 |
| type iv-a pilus assembly atpase pilb | VSVS12_RS13620 | P45792 | Positive | 3026232 - 3027914 | 61838.6 |
| type ii secretion system f family protein | VSVS12_RS13625 | Q9X4G9 | Positive | 3027968 - 3029191 | 45529.5 |
| uracil-dna glycosylase family protein | VSVS12_RS13630 | Q56740 | Positive | 3029297 - 3030165 | 31460.0 |
| dephospho-coa kinase | VSVS12_RS13635 | Q9KPE3 | Positive | 3030170 - 3030778 | 22737.4 |
| cell division protein zapd | VSVS12_RS13640 | A5F5K1 | Positive | 3030813 - 3031553 | 28655.1 |
| dna gyrase inhibitor yacg | VSVS12_RS13645 | Q87LT2 | Positive | 3031629 - 3031823 | 7185.21 |
| 50s ribosomal protein l19 | VSVS12_RS13650 | Q87LT1 | Negative | 3032182 - 3032535 | 13202.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



