Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | VSVS12_RS16900 | Not Available | Positive | 418512 - 419246 | 25799.5 |
| yccf domain-containing protein | VSVS12_RS16905 | Not Available | Positive | 419394 - 419825 | 15697.8 |
| glycerol kinase | VSVS12_RS16910 | Not Available | Negative | 419926 - 420795 | 33336.3 |
| diguanylate cyclase domain-containing protein | VSVS12_RS16915 | P31129 | Negative | 420927 - 422624 | 64470.7 |
| glycogen debranching protein glgx | VSVS12_RS16920 | P0A4Y5 | Negative | 422883 - 424841 | 74703.7 |
| serine hydrolase | VSVS12_RS16925 | Not Available | Positive | 425311 - 426726 | 52981.6 |
| hypothetical protein | VSVS12_RS16930 | Not Available | Positive | 426941 - 427135 | 7318.59 |
| abc transporter substrate-binding protein | VSVS12_RS16935 | Q98H33 | Negative | 427242 - 428474 | 45711.5 |
| atp-binding protein | VSVS12_RS16940 | Q9HZ47 | Negative | 428477 - 429922 | 54337.2 |
| response regulator transcription factor | VSVS12_RS16945 | G3XCY6 | Negative | 429912 - 430619 | 26582.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



