Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS13360 | Not Available | Negative | 2980122 - 2980562 | 15931.0 |
| helix-turn-helix domain-containing protein | VSVS12_RS13365 | Not Available | Negative | 2980656 - 2980841 | 7043.62 |
| site-specific integrase | VSVS12_RS13370 | Not Available | Negative | 2980848 - 2982011 | 44303.5 |
| hypothetical protein | VSVS12_RS13375 | Not Available | Positive | 2982114 - 2983583 | 56989.8 |
| glycine zipper domain-containing protein | VSVS12_RS13380 | Not Available | Negative | 2983734 - 2983934 | 6964.52 |
| hypothetical protein | VSVS12_RS23000 | Not Available | Negative | 2984018 - 2984155 | 5006.21 |
| yafy family protein | VSVS12_RS13385 | P52133 | Positive | 2984470 - 2985399 | 35478.1 |
| duf2787 family protein | VSVS12_RS13390 | Not Available | Negative | 2985928 - 2986356 | 16738.6 |
| is4 family transposase | VSVS12_RS13395 | Not Available | Negative | 2986717 - 2987925 | 45975.1 |
| hypothetical protein | VSVS12_RS23010 | Not Available | Negative | 2987985 - 2988296 | 11896.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



