Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | VSVS12_RS13310 | Not Available | Positive | 2967450 - 2968658 | 45975.1 |
| inorganic diphosphatase | VSVS12_RS13315 | Q9KCG7 | Positive | 2968818 - 2969474 | 23622.2 |
| dmt family transporter | VSVS12_RS13320 | Not Available | Negative | 2969604 - 2970521 | 33113.8 |
| hypothetical protein | VSVS12_RS13325 | Not Available | Negative | 2971215 - 2972342 | 41123.5 |
| duf6844 domain-containing protein | VSVS12_RS13330 | Not Available | Negative | 2972343 - 2973773 | 52453.0 |
| penicillin-binding protein activator lpob | VSVS12_RS13335 | Not Available | Negative | 2973826 - 2974428 | 21781.9 |
| cog3014 family protein | VSVS12_RS13340 | Not Available | Negative | 2974443 - 2975762 | 48190.7 |
| hypothetical protein | VSVS12_RS13345 | Not Available | Negative | 2976094 - 2976702 | 22649.4 |
| rnase h1/viroplasmin domain-containing protein | VSVS12_RS13350 | Not Available | Negative | 2976812 - 2977048 | 9052.86 |
| hypothetical protein | VSVS12_RS13355 | P0DPS1 | Negative | 2977360 - 2980059 | 102589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



