Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain-containing protein | VSVS12_RS13260 | Not Available | Negative | 2956481 - 2957737 | 47486.8 |
| voc family protein | VSVS12_RS13265 | Not Available | Negative | 2957847 - 2958254 | 15407.7 |
| laci family dna-binding transcriptional regulator | VSVS12_RS13270 | P03024 | Negative | 2958327 - 2959325 | 37254.6 |
| chitin disaccharide deacetylase | VSVS12_RS13275 | A5F1P8 | Negative | 2959434 - 2960168 | 27237.5 |
| 6-phospho-beta-glucosidase | VSVS12_RS13280 | P46320 | Negative | 2960207 - 2961529 | 48503.6 |
| pts lactose/cellobiose transporter subunit iia | VSVS12_RS13285 | P69793 | Negative | 2961542 - 2961850 | 11378.8 |
| pts sugar transporter subunit iic | VSVS12_RS13290 | Q45400 | Negative | 2961895 - 2963226 | 48110.9 |
| pts sugar transporter subunit iib | VSVS12_RS13295 | O05505 | Negative | 2963327 - 2963632 | 11071.7 |
| methyl-accepting chemotaxis protein | VSVS12_RS13300 | P35841 | Negative | 2963925 - 2965565 | 60278.3 |
| is4 family transposase | VSVS12_RS13305 | Not Available | Positive | 2965907 - 2967115 | 45975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



