Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | VSVS12_RS13210 | A7MWC3 | Positive | 2947359 - 2948759 | 49985.6 |
| 3-isopropylmalate dehydratase small subunit | VSVS12_RS13215 | Q87ST0 | Positive | 2948771 - 2949373 | 22551.8 |
| duf547 domain-containing protein | VSVS12_RS13220 | Not Available | Positive | 2949507 - 2950301 | 30106.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2950424 - 2950539 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2950556 - 2950631 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2950732 - 2950847 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2950940 - 2953833 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2954113 - 2954188 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2954231 - 2954307 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2954375 - 2955921 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



