Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | VSVS12_RS13165 | P0AC29 | Positive | 2934833 - 2935426 | 22769.7 |
| ribose-5-phosphate isomerase rpia | VSVS12_RS13170 | Q87LL9 | Positive | 2935480 - 2936136 | 23231.8 |
| phosphoglycerate dehydrogenase | VSVS12_RS13175 | P0A9T2 | Positive | 2936462 - 2937691 | 44447.5 |
| acetolactate synthase small subunit | VSVS12_RS13180 | P21622 | Negative | 2937787 - 2938281 | 18188.0 |
| acetolactate synthase 3 large subunit | VSVS12_RS13185 | P00893 | Negative | 2938283 - 2940007 | 62867.0 |
| long-chain fatty acid--coa ligase | VSVS12_RS13190 | P44446 | Negative | 2940427 - 2942235 | 67895.9 |
| transcriptional regulator leuo | VSVS12_RS13195 | P10151 | Negative | 2942441 - 2943409 | 36701.8 |
| uracil-dna glycosylase family protein | VSVS12_RS23395 | Not Available | Negative | 2943810 - 2944033 | 7864.77 |
| 2-isopropylmalate synthase | VSVS12_RS13200 | Q8DEE1 | Positive | 2944449 - 2945996 | 56338.9 |
| 3-isopropylmalate dehydrogenase | VSVS12_RS13205 | Q87SS8 | Positive | 2946108 - 2947199 | 39308.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



