Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | VSVS12_RS13065 | Q87LP1 | Negative | 2917697 - 2918422 | 27218.2 |
| gtpase era | VSVS12_RS13070 | Q87LP0 | Negative | 2918513 - 2919493 | 36938.2 |
| ribonuclease iii | VSVS12_RS13075 | A7MZA8 | Negative | 2919486 - 2920163 | 24837.7 |
| signal peptidase i | VSVS12_RS13080 | P0A1W3 | Negative | 2920179 - 2921075 | 33770.9 |
| translation elongation factor 4 | VSVS12_RS13085 | Q87LN7 | Negative | 2921166 - 2922959 | 65915.6 |
| soxr reducing system rsec family protein | VSVS12_RS13090 | P44060 | Negative | 2923074 - 2923544 | 16422.5 |
| sigma-e factor regulatory protein rseb | VSVS12_RS13095 | P0AFY0 | Negative | 2923541 - 2924521 | 36901.4 |
| sigma-e factor negative regulatory protein | VSVS12_RS13100 | P0AFX8 | Negative | 2924518 - 2925150 | 23041.2 |
| rna polymerase sigma factor rpoe | VSVS12_RS13105 | P0AGB8 | Negative | 2925161 - 2925739 | 21826.0 |
| l-aspartate oxidase | VSVS12_RS13110 | Q9KPA4 | Positive | 2926054 - 2927670 | 60085.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



