Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | VSVS12_RS12915 | Q7MNT0 | Positive | 2878691 - 2879389 | 24921.1 |
| cobalamin biosynthesis family protein | VSVS12_RS12920 | Not Available | Positive | 2879402 - 2880355 | 35120.9 |
| vitamin b12 abc transporter substrate-binding protein btuf | VSVS12_RS12925 | A7MXP0 | Positive | 2880355 - 2881173 | 30581.3 |
| tric cation channel family protein | VSVS12_RS12930 | Q9KPI5 | Positive | 2881295 - 2881915 | 21957.8 |
| threonine synthase | VSVS12_RS12935 | P44503 | Negative | 2882019 - 2883302 | 46365.3 |
| homoserine kinase | VSVS12_RS12940 | Q8DEP3 | Negative | 2883299 - 2884255 | 34437.5 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | VSVS12_RS12945 | P27725 | Negative | 2884270 - 2886729 | 87964.3 |
| ribonuclease regulator | VSVS12_RS12950 | Not Available | Positive | 2887152 - 2887604 | 16514.3 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | VSVS12_RS12955 | Q9KPK1 | Negative | 2887622 - 2888107 | 18023.7 |
| duf3293 domain-containing protein | VSVS12_RS12960 | Not Available | Negative | 2888138 - 2888509 | 14396.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



