Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | VSVS12_RS12865 | Not Available | Positive | 2865269 - 2867311 | 76934.5 |
| peptidase u32 family protein | VSVS12_RS12870 | P45527 | Positive | 2867456 - 2868469 | 37326.1 |
| u32 family peptidase | VSVS12_RS12875 | P45475 | Positive | 2868488 - 2869363 | 32897.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | VSVS12_RS12880 | Q05927 | Positive | 2869582 - 2871141 | 57863.7 |
| hypothetical protein | VSVS12_RS22995 | Not Available | Positive | 2871168 - 2872649 | 57109.7 |
| mate family efflux transporter | VSVS12_RS12890 | Q49VC5 | Negative | 2872676 - 2874019 | 48532.9 |
| marr family winged helix-turn-helix transcriptional regulator | VSVS12_RS12895 | Not Available | Negative | 2874085 - 2874498 | 15829.3 |
| lipoprotein nlpi | VSVS12_RS12900 | Q1C3L9 | Negative | 2874620 - 2875528 | 34721.2 |
| polyribonucleotide nucleotidyltransferase | VSVS12_RS12905 | B7VJH3 | Negative | 2875746 - 2877881 | 76646.1 |
| 30s ribosomal protein s15 | VSVS12_RS12910 | Q87M05 | Negative | 2878185 - 2878454 | 9994.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



