Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | VSVS12_RS12815 | A7MXL2 | Negative | 2854531 - 2856066 | 57957.1 |
| peptide chain release factor 2 | VSVS12_RS12820 | Q5E7P9 | Negative | 2856100 - 2857198 | 41240.9 |
| branched-chain amino acid transport system ii carrier protein | VSVS12_RS12825 | P19072 | Negative | 2857360 - 2858673 | 46123.1 |
| trna1(val) (adenine(37)-n6)-methyltransferase | VSVS12_RS12830 | Q87SB8 | Positive | 2858983 - 2859702 | 26515.9 |
| atp-dependent rna helicase srmb | VSVS12_RS12835 | P21507 | Positive | 2859848 - 2861086 | 46838.8 |
| peptide chain release factor 3 | VSVS12_RS12840 | Q87M18 | Negative | 2861348 - 2862937 | 59285.0 |
| ribosomal protein s18-alanine n-acetyltransferase | VSVS12_RS12845 | P44305 | Negative | 2863113 - 2863562 | 17054.2 |
| dna polymerase iii subunit psi | VSVS12_RS12850 | Not Available | Negative | 2863571 - 2863966 | 14805.7 |
| gnat family n-acetyltransferase | VSVS12_RS12855 | P63419 | Negative | 2864064 - 2864567 | 18723.2 |
| scp2 domain-containing protein | VSVS12_RS12860 | P64601 | Negative | 2864551 - 2865078 | 19904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



