Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane-stress sensor serine endopeptidase degs | VSVS12_RS12765 | P0AEE4 | Positive | 2841687 - 2842751 | 37377.9 |
| dna topoisomerase iv subunit a | VSVS12_RS12770 | P26973 | Negative | 2842834 - 2845119 | 85061.3 |
| dna topoisomerase iv subunit b | VSVS12_RS12775 | P0A2I6 | Negative | 2845123 - 2847003 | 69523.8 |
| esterase yqia | VSVS12_RS12780 | P0A8Z9 | Negative | 2847263 - 2847844 | 22369.6 |
| 3',5'-cyclic-amp phosphodiesterase | VSVS12_RS12785 | Q8DEI1 | Negative | 2847883 - 2848704 | 30346.6 |
| duf1249 family protein | VSVS12_RS12790 | P0ADU9 | Negative | 2848714 - 2849154 | 16796.2 |
| adp-ribose diphosphatase | VSVS12_RS12795 | P83843 | Negative | 2849139 - 2849771 | 23993.1 |
| outer membrane channel protein tolc | VSVS12_RS12800 | Q9K2Y1 | Positive | 2850002 - 2851318 | 47473.2 |
| uracil-dna glycosylase family protein | VSVS12_RS12805 | P03835 | Negative | 2851392 - 2852722 | 51178.6 |
| cyclic-di-gmp-binding transcriptional regulator vpsr | VSVS12_RS12810 | Q9APD9 | Negative | 2852870 - 2854204 | 50157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



