Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autonomous glycyl radical cofactor grca | VSVS12_RS12555 | Q87SC7 | Positive | 2796656 - 2797033 | 13931.3 |
| n-acetylglucosamine-binding protein gbpa | VSVS12_RS12560 | Q87FT0 | Positive | 2797506 - 2798966 | 53123.7 |
| lysr family transcriptional regulator | VSVS12_RS12565 | Q9KPI4 | Positive | 2799111 - 2799977 | 31819.9 |
| uracil-dna glycosylase family protein | VSVS12_RS12570 | Not Available | Negative | 2799907 - 2800685 | 28955.5 |
| carbamoyl-phosphate synthase large subunit | VSVS12_RS12580 | Q87SF3 | Negative | 2800880 - 2804110 | 117560.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | VSVS12_RS12585 | Q87SF4 | Negative | 2804127 - 2805266 | 40879.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | VSVS12_RS12590 | A7MXR0 | Negative | 2805782 - 2806591 | 28632.3 |
| 8-oxo-dgtp diphosphatase mutt | VSVS12_RS12595 | P08337 | Negative | 2806708 - 2807106 | 15337.2 |
| preprotein translocase subunit seca | VSVS12_RS12600 | Q87SF7 | Negative | 2807416 - 2810145 | 103231.0 |
| duf721 domain-containing protein | VSVS12_RS12605 | Not Available | Positive | 2810466 - 2810930 | 17608.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



