Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | VSVS12_RS16800 | Not Available | Positive | 396098 - 396622 | 18848.5 |
| hypothetical protein | VSVS12_RS16805 | Not Available | Positive | 396859 - 397233 | 13961.8 |
| leucine-rich repeat domain-containing protein | VSVS12_RS16810 | Not Available | Negative | 397418 - 399415 | 73347.4 |
| hypothetical protein | VSVS12_RS16815 | Not Available | Negative | 399575 - 400243 | 25674.5 |
| spermidine n1-acetyltransferase | VSVS12_RS16820 | Q9KL03 | Negative | 400537 - 401064 | 20833.7 |
| coniferyl aldehyde dehydrogenase | VSVS12_RS16825 | Q9I6C8 | Positive | 401339 - 402775 | 53975.6 |
| protein translocase subunit secf | VSVS12_RS16830 | E9RGS4 | Negative | 402868 - 403764 | 32375.8 |
| protein translocase subunit secd | VSVS12_RS16835 | E9RGS3 | Negative | 403767 - 405581 | 65693.0 |
| hypothetical protein | VSVS12_RS16840 | Not Available | Negative | 405790 - 406287 | 18766.4 |
| m3 family metallopeptidase | VSVS12_RS16845 | Not Available | Negative | 406613 - 408460 | 69524.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



