Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Peptidase s24-like protein | VSVS12_RS16025 | Not Available | Positive | 244407 - 245156 | 28558.0 |
| gnat family n-acetyltransferase | VSVS12_RS14865 | Not Available | Positive | 1188 - 1679 | 18284.9 |
| flagellar brake protein | VSVS12_RS14870 | Q9KNC3 | Positive | 2284 - 3021 | 27052.6 |
| duf368 domain-containing protein | VSVS12_RS14875 | Not Available | Positive | 3133 - 4053 | 33686.4 |
| abc transporter atp-binding protein | VSVS12_RS14880 | Q57180 | Positive | 4298 - 6154 | 68930.5 |
| duf445 domain-containing protein | VSVS12_RS14885 | Not Available | Positive | 6349 - 7053 | 25896.0 |
| lrp/asnc family transcriptional regulator | VSVS12_RS14890 | P0A2S0 | Negative | 7126 - 7593 | 17516.2 |
| hypothetical protein | VSVS12_RS14895 | Not Available | Negative | 7691 - 7918 | 8675.31 |
| sodium/proline symporter putp | VSVS12_RS14900 | P94392 | Negative | 8096 - 9586 | 53213.4 |
| 1-pyrroline-5-carboxylate dehydrogenase | VSVS12_RS14905 | Not Available | Negative | 9681 - 10373 | 24592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



