Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | VSVS12_RS12455 | Not Available | Positive | 2772521 - 2773414 | 33713.2 |
| elongation factor g | VSVS12_RS12460 | Q87M30 | Negative | 2773550 - 2775637 | 76417.0 |
| dna repair protein rada | VSVS12_RS12465 | P24554 | Negative | 2776198 - 2777577 | 49308.7 |
| pilz domain-containing protein | VSVS12_RS12470 | Not Available | Positive | 2777711 - 2780053 | 90043.2 |
| uracil-dna glycosylase family protein | VSVS12_RS12475 | Q9KPM2 | Negative | 2780134 - 2781113 | 36456.0 |
| ytjb family periplasmic protein | VSVS12_RS12480 | Not Available | Positive | 2781265 - 2781867 | 22407.5 |
| is3 family transposase | VSVS12_RS12485 | P16940 | Negative | 2782002 - 2783173 | 45489.1 |
| purine-nucleoside phosphorylase | VSVS12_RS12495 | Q87M25 | Negative | 2783343 - 2784062 | 25967.3 |
| phosphopentomutase | VSVS12_RS12500 | Q87M24 | Negative | 2784126 - 2785346 | 43948.9 |
| thymidine phosphorylase | VSVS12_RS12505 | Q87M23 | Negative | 2785404 - 2786732 | 46997.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



