Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS12410 | Not Available | Negative | 2763490 - 2764008 | 19596.6 |
| type ii and iii secretion system protein family protein | VSVS12_RS12415 | P55702 | Negative | 2764005 - 2765324 | 48495.1 |
| flp pilus assembly protein cpab | VSVS12_RS12420 | Not Available | Negative | 2765347 - 2766141 | 27922.7 |
| is4 family transposase | VSVS12_RS12425 | Not Available | Negative | 2766227 - 2767435 | 45975.1 |
| prepilin peptidase | VSVS12_RS12430 | Not Available | Negative | 2767539 - 2767910 | 14287.6 |
| flp family type ivb pilin | VSVS12_RS12435 | Not Available | Negative | 2767929 - 2768129 | 7020.54 |
| hypothetical protein | VSVS12_RS12440 | Not Available | Positive | 2768443 - 2768853 | 15632.9 |
| is4 family transposase | VSVS12_RS12445 | Not Available | Positive | 2768893 - 2770101 | 45975.1 |
| helix-turn-helix transcriptional regulator | VSVS12_RS22685 | Not Available | Positive | 2770186 - 2770473 | 11042.0 |
| amp-binding protein | VSVS12_RS12450 | B2HGV4 | Positive | 2770655 - 2772340 | 63012.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



