Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate efflux transporter | VSVS12_RS12360 | Not Available | Positive | 2754119 - 2755264 | 40480.7 |
| ompa family protein | VSVS12_RS12365 | Q9I4Z4 | Negative | 2755349 - 2755987 | 23624.6 |
| tade/tadg family type iv pilus assembly protein | VSVS12_RS12370 | Not Available | Negative | 2756033 - 2757304 | 45440.9 |
| tight adherence pilus pseudopilin tadf | VSVS12_RS12375 | Not Available | Negative | 2757308 - 2757859 | 20169.1 |
| tade/tadg family type iv pilus assembly protein | VSVS12_RS12380 | Not Available | Negative | 2757834 - 2758319 | 18157.3 |
| lipopolysaccharide assembly protein lapb | VSVS12_RS12385 | Not Available | Negative | 2758329 - 2759126 | 29967.5 |
| type ii secretion system f family protein | VSVS12_RS12390 | Not Available | Negative | 2759137 - 2760039 | 33912.7 |
| type ii secretion system f family protein | VSVS12_RS12395 | Not Available | Negative | 2760039 - 2760959 | 35325.9 |
| cpaf family protein | VSVS12_RS12400 | P9WMT2 | Negative | 2760956 - 2762239 | 47535.0 |
| type ii secretion system protein z | VSVS12_RS12405 | Not Available | Negative | 2762243 - 2763478 | 45680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



