Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin c | VSVS12_RS12310 | Q8K9W0 | Positive | 2742943 - 2743551 | 22068.2 |
| iron-sulfur cluster assembly scaffold protein | VSVS12_RS12315 | Not Available | Positive | 2744088 - 2744780 | 24476.4 |
| gggtgrt protein | VSVS12_RS12320 | Not Available | Positive | 2744836 - 2745828 | 35137.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | VSVS12_RS12325 | Q9KPN7 | Positive | 2746256 - 2747287 | 35643.7 |
| membrane-bound lytic murein transglycosylase mltc | VSVS12_RS12330 | A6TDX1 | Positive | 2747435 - 2748556 | 42586.9 |
| nnrs family protein | VSVS12_RS12335 | Not Available | Negative | 2748621 - 2749805 | 44445.2 |
| gamma-glutamylcyclotransferase family protein | VSVS12_RS12340 | Not Available | Positive | 2750087 - 2750641 | 20612.6 |
| mate family efflux transporter | VSVS12_RS12345 | Not Available | Positive | 2750773 - 2752116 | 49165.8 |
| hypothetical protein | VSVS12_RS12350 | Not Available | Positive | 2752338 - 2753006 | 24856.8 |
| lysr family transcriptional regulator | VSVS12_RS12355 | P77746 | Negative | 2753078 - 2754013 | 35080.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



