Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | VSVS12_RS12260 | E9RGS4 | Negative | 2729132 - 2730079 | 34248.9 |
| protein translocase subunit secd | VSVS12_RS12265 | E9RGS3 | Negative | 2730094 - 2731950 | 66937.5 |
| preprotein translocase subunit yajc | VSVS12_RS12270 | P0ADZ9 | Negative | 2731971 - 2732300 | 11840.7 |
| trna guanosine(34) transglycosylase tgt | VSVS12_RS12275 | Q8DEY0 | Negative | 2732503 - 2733636 | 43002.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | VSVS12_RS12280 | Q87S37 | Negative | 2733909 - 2734961 | 38933.3 |
| methyl-accepting chemotaxis protein | VSVS12_RS12285 | Not Available | Positive | 2735237 - 2737177 | 70979.6 |
| cbs domain-containing protein | VSVS12_RS12290 | P39066 | Positive | 2737446 - 2737889 | 16530.1 |
| isocitrate lyase | VSVS12_RS12295 | P51066 | Negative | 2738133 - 2739443 | 47907.1 |
| malate synthase a | VSVS12_RS12300 | P08997 | Negative | 2739604 - 2741241 | 61515.0 |
| hydrogen peroxide-inducible genes activator | VSVS12_RS12305 | P52667 | Negative | 2741838 - 2742743 | 33652.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



