Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2850 domain-containing protein | VSVS12_RS12110 | Not Available | Negative | 2692564 - 2692986 | 15657.8 |
| amino-acid n-acetyltransferase | VSVS12_RS12115 | P59294 | Positive | 2693147 - 2694484 | 49015.0 |
| hypothetical protein | VSVS12_RS12120 | Not Available | Positive | 2694730 - 2694918 | 7206.71 |
| exodeoxyribonuclease v subunit alpha | VSVS12_RS12125 | P04993 | Negative | 2694964 - 2697078 | 77539.9 |
| exodeoxyribonuclease v subunit beta | VSVS12_RS12130 | P08394 | Negative | 2697075 - 2700695 | 134534.0 |
| exodeoxyribonuclease v subunit gamma | VSVS12_RS12135 | P07648 | Negative | 2701049 - 2704570 | 133102.0 |
| tdt family transporter | VSVS12_RS12140 | Not Available | Negative | 2704757 - 2705731 | 34838.5 |
| lysr substrate-binding domain-containing protein | VSVS12_RS12145 | P0ACR6 | Positive | 2705888 - 2706787 | 33429.3 |
| yebg family protein | VSVS12_RS12150 | P0ACZ1 | Positive | 2706958 - 2707266 | 11396.5 |
| vibriobactin export rnd transporter permease subunit vexh | VSVS12_RS12155 | Not Available | Negative | 2707359 - 2710496 | 114208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



