Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | VSVS12_RS12060 | B7VJU2 | Negative | 2681358 - 2682851 | 55677.9 |
| outer membrane protein assembly factor bamb | VSVS12_RS12065 | Q9KTW8 | Negative | 2683038 - 2684198 | 41447.9 |
| yfgm family protein | VSVS12_RS12070 | P76576 | Negative | 2684210 - 2684824 | 22333.1 |
| histidine--trna ligase | VSVS12_RS12075 | Q87S15 | Negative | 2684929 - 2686197 | 47165.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | VSVS12_RS12080 | Q8DEZ8 | Negative | 2686233 - 2687351 | 40650.0 |
| cytoskeleton protein rodz | VSVS12_RS12085 | A1JKS1 | Negative | 2687360 - 2688316 | 34590.5 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | VSVS12_RS12090 | Q7MNF3 | Negative | 2688749 - 2689873 | 42095.6 |
| cysteine desulfurase sulfur acceptor subunit csde | VSVS12_RS12095 | P0AGF3 | Negative | 2690007 - 2690450 | 16231.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | VSVS12_RS12100 | Q46927 | Negative | 2690461 - 2691270 | 29459.4 |
| murein transglycosylase a | VSVS12_RS12105 | Q9KPQ4 | Negative | 2691374 - 2692474 | 40213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



