Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS16750 | Not Available | Negative | 384296 - 384607 | 11291.0 |
| 4fe-4s dicluster domain-containing protein | VSVS12_RS16755 | Not Available | Negative | 384607 - 386121 | 57443.8 |
| tetratricopeptide repeat protein | VSVS12_RS16760 | Not Available | Negative | 386141 - 387247 | 42392.6 |
| arac family transcriptional regulator | VSVS12_RS16765 | Q9WW32 | Negative | 387501 - 388376 | 33313.3 |
| lyse family translocator | VSVS12_RS16770 | Not Available | Negative | 388443 - 389036 | 21143.5 |
| abc-f family atpase | VSVS12_RS16775 | P0A9U5 | Positive | 389385 - 390965 | 58724.3 |
| vf530 family dna-binding protein | VSVS12_RS16780 | Not Available | Positive | 391121 - 391549 | 16935.2 |
| sodium/glutamate symporter | VSVS12_RS16785 | P0AER8 | Positive | 391944 - 393170 | 44053.8 |
| diguanylate cyclase | VSVS12_RS16790 | Not Available | Positive | 393511 - 395241 | 64661.1 |
| duf2750 domain-containing protein | VSVS12_RS16795 | Not Available | Positive | 395416 - 395787 | 14247.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



