Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | VSVS12_RS11905 | Not Available | Negative | 2644236 - 2645407 | 45513.1 |
| four helix bundle protein | VSVS12_RS11910 | Not Available | Positive | 2645561 - 2645908 | 13109.9 |
| dicarboxylate/amino acid:cation symporter | VSVS12_RS11915 | Not Available | Negative | 2646110 - 2647387 | 43944.7 |
| nucleotide exchange factor grpe | VSVS12_RS11920 | Q7MN92 | Negative | 2647821 - 2648426 | 22472.4 |
| nad(+) kinase | VSVS12_RS11925 | B7VJW6 | Positive | 2648572 - 2649456 | 32837.4 |
| dna repair protein recn | VSVS12_RS11935 | A5F379 | Positive | 2650042 - 2651706 | 61203.1 |
| outer membrane protein assembly factor bame | VSVS12_RS11940 | A5F378 | Positive | 2651859 - 2652218 | 13589.4 |
| rnfh family protein | VSVS12_RS11945 | Q87RY0 | Negative | 2652294 - 2652647 | 13218.1 |
| srpbcc family protein | VSVS12_RS11950 | A5F376 | Negative | 2652637 - 2653080 | 16232.5 |
| ssra-binding protein smpb | VSVS12_RS11955 | A7MWX4 | Positive | 2653199 - 2653684 | 18370.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



