Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna adenosine(34) deaminase tada | VSVS12_RS11855 | Q8XA44 | Negative | 2633979 - 2634515 | 19591.2 |
| hemolysin family protein | VSVS12_RS11860 | P74409 | Negative | 2634644 - 2635924 | 47118.2 |
| abgt family transporter | VSVS12_RS11865 | P46133 | Negative | 2636052 - 2637611 | 54772.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS12_RS11870 | Not Available | Negative | 2637863 - 2638345 | 17165.8 |
| hypothetical protein | VSVS12_RS11875 | Not Available | Negative | 2638335 - 2638850 | 19812.2 |
| pilw family protein | VSVS12_RS11880 | Not Available | Negative | 2638847 - 2639485 | 23549.3 |
| gsph/fimt family pseudopilin | VSVS12_RS11885 | Not Available | Negative | 2639463 - 2639972 | 18377.2 |
| type iv pilin protein | VSVS12_RS11890 | Not Available | Positive | 2640100 - 2640519 | 15433.7 |
| molecular chaperone dnaj | VSVS12_RS11895 | Q87RX2 | Negative | 2640629 - 2641777 | 41225.7 |
| molecular chaperone dnak | VSVS12_RS11900 | A7MWW0 | Negative | 2642062 - 2643975 | 68773.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



