Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | VSVS12_RS11760 | O32445 | Positive | 2611176 - 2612312 | 41014.0 |
| rok family protein | VSVS12_RS11765 | P0AF22 | Positive | 2612315 - 2613529 | 43930.9 |
| cation:proton antiporter family protein | VSVS12_RS11770 | P39830 | Positive | 2613616 - 2615202 | 57411.4 |
| asparagine synthase b | VSVS12_RS11775 | P22106 | Positive | 2615410 - 2617074 | 62229.6 |
| peptide mfs transporter | VSVS12_RS11780 | P94408 | Positive | 2617364 - 2618755 | 50607.5 |
| trab/gumn family protein | VSVS12_RS11785 | Not Available | Positive | 2619024 - 2619893 | 32511.0 |
| Trna-pro | Not Available | Not Available | Positive | 2620056 - 2620132 | Not Available |
| duf3149 domain-containing protein | VSVS12_RS11795 | Not Available | Positive | 2620389 - 2620529 | 5194.52 |
| dna endonuclease smra | VSVS12_RS11800 | P76053 | Positive | 2620760 - 2621341 | 22305.9 |
| 23s rrna pseudouridine(2604) synthase rluf | VSVS12_RS11805 | Q8Z1V3 | Positive | 2621434 - 2622579 | 43302.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



