Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS11610 | Not Available | Negative | 2580638 - 2581396 | 28946.2 |
| hypothetical protein | VSVS12_RS11615 | Not Available | Negative | 2581291 - 2581662 | 13994.0 |
| ynce family protein | VSVS12_RS11620 | Not Available | Negative | 2581659 - 2583608 | 73062.6 |
| trna pseudouridine(65) synthase truc | VSVS12_RS11625 | Q87MD4 | Negative | 2583929 - 2584651 | 27789.3 |
| yqcc family protein | VSVS12_RS11630 | Q57152 | Negative | 2584652 - 2584966 | 11972.5 |
| duf3549 family protein | VSVS12_RS11635 | Not Available | Positive | 2585043 - 2586080 | 38997.1 |
| duf3301 domain-containing protein | VSVS12_RS11640 | Not Available | Positive | 2586095 - 2586394 | 11693.5 |
| gnat family n-acetyltransferase | VSVS12_RS11645 | Not Available | Negative | 2586342 - 2586905 | 21248.3 |
| hypothetical protein | VSVS12_RS11650 | Not Available | Positive | 2587751 - 2588032 | 10234.7 |
| succinate--coa ligase subunit alpha | VSVS12_RS11655 | Q51567 | Negative | 2588176 - 2589048 | 29947.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



