Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase fe-s protein | VSVS12_RS11450 | P45015 | Negative | 2550878 - 2551573 | 25197.8 |
| cytochrome c nitrite reductase pentaheme subunit | VSVS12_RS11455 | Not Available | Negative | 2551575 - 2552162 | 21595.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | VSVS12_RS11460 | Q5E4J7 | Positive | 2552651 - 2554078 | 52956.1 |
| nitrite reductase | VSVS12_RS11465 | Not Available | Negative | 2554218 - 2554757 | 20111.1 |
| duf2956 domain-containing protein | VSVS12_RS11470 | Not Available | Positive | 2554848 - 2555195 | 13114.8 |
| duf4156 domain-containing protein | VSVS12_RS11475 | Not Available | Positive | 2555176 - 2555535 | 13204.8 |
| helix-turn-helix domain-containing protein | VSVS12_RS11480 | Not Available | Negative | 2555662 - 2555949 | 10869.0 |
| arsc family reductase | VSVS12_RS11485 | P44515 | Positive | 2556149 - 2556496 | 13218.8 |
| succinyl-diaminopimelate desuccinylase | VSVS12_RS11490 | Q9KQ52 | Positive | 2556524 - 2557657 | 40758.3 |
| m15 family metallopeptidase | VSVS12_RS11495 | Not Available | Positive | 2557660 - 2558340 | 25627.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



